dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00518
Location and strand information: 39633 - 41603 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.7058
Protein molecular weight: 74169.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00519
Location and strand information: 42294 - 42536 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00520
Location and strand information: 42810 - 43994 (+)
Family: 2.A.1.68.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00521
Location and strand information: 44229 - 45224 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional regulator LacR

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00522
Location and strand information: 45359 - 46000 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00523
Location and strand information: 46496 - 47683 (+)
Family: 2.A.2.5.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00524
Location and strand information: 47697 - 48092 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00525
Location and strand information: 48156 - 48503 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002542_26|CGC2
Gene ID: MGYG000002542_00526
Location and strand information: 48677 - 49423 (+)
Family: GH115
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3794
Protein molecular weight: 28386.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002542_00518	Non-reducing end beta-L-arabinofuranosidase	CAZyme	39633	41603	+	GH127
MGYG000002542_00519	hypothetical protein	null	42294	42536	+	No domain
MGYG000002542_00520	hypothetical protein	TC	42810	43994	+	2.A.1.68.1
MGYG000002542_00521	HTH-type transcriptional regulator LacR	TF	44229	45224	+	LacI
MGYG000002542_00522	HTH-type transcriptional activator RhaR	TF	45359	46000	-	HTH_AraC+HTH_AraC
MGYG000002542_00523	hypothetical protein	TC	46496	47683	+	2.A.2.5.2
MGYG000002542_00524	hypothetical protein	null	47697	48092	+	No domain
MGYG000002542_00525	hypothetical protein	null	48156	48503	+	No domain
MGYG000002542_00526	hypothetical protein	CAZyme	48677	49423	+	GH115
Protein ID	Protein Name	Type	Start	End	Strand	Signature